STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_03968Uncharacterized protein. (342 aa)    
Predicted Functional Partners:
PFICI_06868
RanBD1 domain-containing protein.
   
 
 0.957
PFICI_05670
SAP domain-containing protein.
   
 0.872
PFICI_11578
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
   
 0.857
PFICI_12990
Uncharacterized protein.
   
 0.851
PFICI_05018
Uncharacterized protein.
    
 0.818
PFICI_07165
RNA-binding protein C23A1.09.
    
 0.789
PFICI_03387
RRM domain-containing protein.
    
 0.782
PFICI_05575
Pinin_SDK_memA domain-containing protein.
   
 0.764
PFICI_14586
Fip1 domain-containing protein.
   
 0.763
PFICI_07748
Uncharacterized protein.
   
 0.705
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.