STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_03531Threonine--tRNA ligase. (812 aa)    
Predicted Functional Partners:
PFICI_06255
AA_TRNA_LIGASE_II domain-containing protein.
  
  
 
0.906
PFICI_03967
Tr-type G domain-containing protein.
 
 0.771
PFICI_12670
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.714
PFICI_09168
Uncharacterized protein.
  
 
 0.711
PFICI_02219
Uncharacterized protein.
   
 
 0.699
PFICI_04902
54S ribosomal protein L19; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.692
PFICI_06138
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
   
 
 0.682
PFICI_08397
Tryptophan synthase.
  
  
 0.666
PFICI_13194
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.661
PFICI_08619
Uncharacterized protein.
   
 
 0.656
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.