STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_00122Uncharacterized protein. (535 aa)    
Predicted Functional Partners:
PFICI_08021
Nuclear cap-binding protein subunit 2.
    
 0.763
PFICI_07748
Uncharacterized protein.
    
 0.739
PFICI_00334
YTH domain-containing protein.
    
 0.727
PFICI_14586
Fip1 domain-containing protein.
   
 0.691
PFICI_00269
Splicing factor U2AF subunit A.
   
 0.689
PFICI_01180
DUF3453 domain-containing protein.
    
 0.677
PFICI_06955
Protein cft-1.
   
 0.667
PFICI_07806
Small nuclear ribonucleoprotein Sm D2.
   
 0.647
PFICI_04438
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.647
PFICI_04439
Importin N-terminal domain-containing protein.
    
 
 0.646
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.