STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_01201HMG box domain-containing protein. (669 aa)    
Predicted Functional Partners:
PFICI_10286
HECT domain-containing protein.
    
 
 0.783
PFICI_12940
RRM domain-containing protein.
   
  
 0.603
PFICI_14942
Uncharacterized protein.
     
 0.584
PFICI_11736
Uncharacterized protein.
     
 0.584
PFICI_09926
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
  
 0.547
PFICI_14547
Uncharacterized protein.
   
 0.546
PFICI_14552
Uridine kinase; Belongs to the uridine kinase family.
   
 0.546
PFICI_12103
Uracil phosphoribosyltransferase.
   
 0.546
PFICI_01477
Homeobox domain-containing protein.
      
 0.523
PFICI_14952
Uncharacterized protein.
   
 0.489
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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