STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOC1_g10015844Cohesin subunit rad21. (617 aa)    
Predicted Functional Partners:
FOC1_g10006657
Structural maintenance of chromosomes protein.
   
 0.989
FOC1_g10013687
Chromosome segregation protein sudA.
   
 0.989
FOC1_g10013906
Sister chromatid cohesion protein pds5.
   
 0.985
FOC1_g10005114
Sister chromatid cohesion protein.
  
 0.982
FOC1_g10015395
Cell cycle serine/threonine-protein kinase CDC5/MSD2.
   
 0.982
FOC1_g10013569
Uncharacterized protein.
   
 0.978
FOC1_g10008481
N-acetyltransferase eso1.
   
 0.977
FOC1_g10008681
Separin.
   
 0.933
FOC1_g10010985
Mitosis inhibitor protein kinase wee1.
   
 
 0.919
FOC1_g10014913
Structural maintenance of chromosomes protein 5.
   
 0.917
Your Current Organism:
Fusarium oxysporum f. sp. cubense race 1
NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.