STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOC1_g10015925Uncharacterized protein. (157 aa)    
Predicted Functional Partners:
FOC1_g10005923
Protein SDS23; Involved in DNA replication and cell separation. Belongs to the SDS23 family.
   
 0.927
FOC1_g10012336
Putative Rho-GTPase-activating protein 6.
   
 0.927
FOC1_g10012337
Nuclear protein SNF4.
   
 0.927
FOC1_g10014139
Meiotically up-regulated protein 70 protein.
   
 0.908
FOC1_g10013758
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 0.876
FOC1_g10013891
Calcium/calmodulin-dependent protein kinase kinase 1.
    
 0.804
FOC1_g10013308
Serine/threonine-protein kinase ssp1.
    
 0.804
FOC1_g10009440
Acetyl-CoA carboxylase.
    
 0.800
FOC1_g10010471
Guanine nucleotide-binding protein subunit beta.
    
 0.792
FOC1_g10014915
WD repeat-containing protein mip1.
     
 0.776
Your Current Organism:
Fusarium oxysporum f. sp. cubense race 1
NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.