STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOC1_g10007005Putative chaperone protein HSP31. (239 aa)    
Predicted Functional Partners:
FOC1_g10013496
Myosin regulatory light chain 1.
   
 0.857
FOC1_g10006646
Calmodulin; Belongs to the calmodulin family.
   
 0.831
FOC1_g10007572
Uncharacterized protein.
   
 0.831
FOC1_g10010257
Myosin regulatory light chain cdc4.
   
 0.831
FOC1_g10005972
VOC domain-containing protein.
    
 0.821
FOC1_g10007827
Putative hydroxyacylglutathione hydrolase C13B11.03c.
     
 0.815
FOC1_g10011290
Lactoylglutathione lyase.
    
 0.804
FOC1_g10007824
Lactoylglutathione lyase.
    
 0.804
FOC1_g10011811
Uncharacterized protein.
    
 0.779
FOC1_g10013626
Uncharacterized protein.
   
 
  0.765
Your Current Organism:
Fusarium oxysporum f. sp. cubense race 1
NCBI taxonomy Id: 1229664
Other names: F. oxysporum f. sp. cubense race 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.