STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRFL_0321Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. (391 aa)    
Predicted Functional Partners:
GRFL_0320
Sialic acid-specific 9-O-acetylesterase; Belongs to the glycosyl hydrolase 2 family.
 
     0.922
GRFL_0317
Glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
     0.850
GRFL_0318
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
     0.846
GRFL_0333
Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
 
   
 0.795
GRFL_0336
Endo-1,4-beta-xylanase A precursor.
 
  
 0.795
GRFL_0337
Hypothetical protein.
 
     0.773
GRFL_2284
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
     0.648
GRFL_0323
TonB-dependent receptor.
 
     0.613
GRFL_1430
Hypothetical protein.
  
  
 0.605
GRFL_0622
Endo-1,4-beta-xylanase A precursor.
 
  
 0.601
Your Current Organism:
Gramella flava
NCBI taxonomy Id: 1229726
Other names: G. flava JLT2011, Gramella flava JLT2011, Gramella sp. JLT2011
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