STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GRFL_2817ParE toxin protein. (50 aa)    
Predicted Functional Partners:
GRFL_2818
ParD protein (antitoxin to ParE).
 
 
 0.976
GRFL_2830
Hypothetical protein.
  
 
 0.763
GRFL_0625
Hypothetical protein.
  
     0.495
GRFL_3385
Hypothetical protein.
  
     0.469
GRFL_1694
Hypothetical protein.
  
     0.455
GRFL_0553
Putative DNA mismatch repair protein.
  
     0.413
Your Current Organism:
Gramella flava
NCBI taxonomy Id: 1229726
Other names: G. flava JLT2011, Gramella flava JLT2011, Gramella sp. JLT2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.