STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX21970.1SH3 domain-containing protein; PFAM: Bacterial SH3 domain. (100 aa)    
Predicted Functional Partners:
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
    0.701
APX22679.1
'PFAM: Group 4 capsule polysaccharide lipoprotein gfcB, YjbF'.
  
     0.567
APX21971.1
ATP-binding cassette, subfamily B; PFAM: ABC transporter; ABC transporter transmembrane region; 'TIGRFAM: ABC transporter, permease/ATP-binding protein'.
       0.494
APX21335.1
Vitamin B12 transporter; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.473
APX21570.1
Hypothetical protein.
  
     0.460
APX25238.1
PFAM: Acetyltransferase (GNAT) domain.
  
     0.458
APX21573.1
PFAM: Biopolymer transport protein ExbD/TolR.
  
     0.441
APX23118.1
Uncharacterized protein conserved in bacteria, putative lipoprotein; PFAM: Membrane-bound lysozyme-inhibitor of c-type lysozyme; Protein of unknown function (DUF1311).
 
     0.434
APX21862.1
Flp pilus assembly protein, pilin Flp.
  
     0.426
APX21863.1
Flp pilus assembly protein, pilin Flp.
  
     0.426
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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