STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX22337.1PFAM: HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family. (319 aa)    
Predicted Functional Partners:
APX21929.1
PFAM: N-terminal half of MaoC dehydratase.
 
 
 0.979
APX22776.1
Glyoxylate reductase; 'PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain'.
 
  
 0.922
APX21932.1
(3S)-malyl-CoA thioesterase; PFAM: HpcH/HpaI aldolase/citrate lyase family; Belongs to the HpcH/HpaI aldolase family.
  
  
 
0.921
APX21499.1
Biotin carboxyl carrier protein; 'PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme'; 'TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit'; biotin carboxylase.
  
 
 0.920
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
    
 0.917
APX21506.1
propionyl-CoA carboxylase carboxyltransferase subunit; PFAM: Carboxyl transferase domain.
  
 
 0.913
APX23847.1
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase; PFAM: Aminotransferase class-V.
  
 
 0.911
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.907
APX23452.1
Hydroxypyruvate reductase; 'PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain'.
    
 0.907
APX24980.1
acetyl-CoA synthetase; PFAM: AMP-binding enzyme; Acetyl-coenzyme A synthetase N-terminus; AMP-binding enzyme C-terminal domain; TIGRFAM: acetoacetyl-CoA synthase.
    
 0.907
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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