STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX22887.1Putative membrane protein; PFAM: Protein of unknown function (DUF989). (408 aa)    
Predicted Functional Partners:
APX23105.1
Chitin deacetylase; PFAM: OHCU decarboxylase; Polysaccharide deacetylase; TIGRFAM: OHCU decarboxylase; putative urate catabolism protein.
 
    0.879
APX23104.1
5-hydroxyisourate hydrolase; PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
  
 0.860
APX23107.1
PFAM: Ureidoglycolate hydrolase.
 
    0.846
APX23547.1
Xanthine dehydrogenase small subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain; [2Fe-2S] binding domain; 'TIGRFAM: xanthine dehydrogenase, small subunit'.
 
     0.777
APX23549.1
PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase.
 
     0.777
APX23550.1
Molybdenum cofactor sulfurylase; PFAM: XdhC Rossmann domain; XdhC and CoxI family; TIGRFAM: xanthine dehydrogenase accessory protein XdhC.
 
     0.716
APX23548.1
'PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain'.
  
     0.694
APX21359.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
     0.667
APX23106.1
(S)-ureidoglycine aminohydrolase; PFAM: Cupin domain; TIGRFAM: putative allantoin catabolism protein.
 
     0.629
APX25515.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
     
  0.499
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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