STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX23832.1PFAM: Response regulator receiver domain. (117 aa)    
Predicted Functional Partners:
APX24438.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; 'PFAM: CheB methylesterase; HWE histidine kinase; CheR methyltransferase, SAM binding domain; PAS domain; CheR methyltransferase, all-alpha domain'.
  
 
 0.874
APX21644.1
Two-component system, chemotaxis family, sensor kinase CheA; 'PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain'.
 
 
 0.640
APX21797.1
Flagellar motor switch protein FliM; PFAM: Type III flagellar switch regulator (C-ring) FliN C-term.
  
  
 0.573
APX24215.1
'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain'.
 
 
 0.561
APX24202.1
Flagellar motor switch protein FliG; PFAM: FliG middle domain; FliG C-terminal domain; FliG N-terminal domain.
  
  
 0.559
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
  
  
 0.556
APX22910.1
PAS domain S-box-containing protein; 'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain'; TIGRFAM: PAS domain S-box.
 
 
 0.550
APX24579.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA; 'PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS domain; PAS fold'; TIGRFAM: PAS domain S-box.
 
 
 0.532
APX24302.1
PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signalling domain.
 
 
 0.531
APX24319.1
Two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL; 'PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phospho-acceptor) domain; PAS fold'.
  
 
 0.504
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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