STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX24264.1glycine/D-amino acid oxidase, deaminating; PFAM: FAD dependent oxidoreductase. (449 aa)    
Predicted Functional Partners:
APX23950.1
Sarcosine oxidase subunit alpha; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 2Fe-2S iron-sulfur cluster binding domain; Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; 'TIGRFAM: sarcosine oxidase, alpha subunit family, heterotetrameric form'; Belongs to the GcvT family.
 
 
 0.818
APX25673.1
Sarcosine oxidase subunit alpha; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; FAD dependent oxidoreductase; 'TIGRFAM: sarcosine oxidase, alpha subunit family, heterotetrameric form'; Belongs to the GcvT family.
  
 
 0.788
APX21592.1
'PFAM: Glutamine synthetase, catalytic domain'.
 
  
 0.517
APX23949.1
'PFAM: Sarcosine oxidase, delta subunit family'; 'TIGRFAM: sarcosine oxidase, delta subunit family, heterotetrameric form'.
 
 
 0.451
APX24265.1
D-lactate dehydrogenase (cytochrome); 'PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain'; 'TIGRFAM: glycolate oxidase, subunit GlcD'.
       0.450
APX25665.1
Diaminobutyrate aminotransferase apoenzyme; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.439
APX24159.1
4-aminobutyrate aminotransferase family protein; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.438
APX24754.1
Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain.
 
 
 0.430
APX21590.1
Glutamate--putrescine ligase; 'PFAM: Glutamine synthetase, catalytic domain'.
 
  
 0.413
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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