STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX24497.1Peptide/nickel transport system substrate-binding protein; 'PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle'. (532 aa)    
Predicted Functional Partners:
APX24499.1
PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.951
APX24498.1
PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.930
APX24034.1
PFAM: Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C.
 
 0.906
APX24033.1
PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.853
APX24496.1
Biotin/methionine sulfoxide reductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.814
APX24143.1
PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.790
APX24477.1
PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.763
APX22302.1
PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.758
APX24476.1
PFAM: Binding-protein-dependent transport system inner membrane component; N-terminal TM domain of oligopeptide transport permease C.
 
 0.748
APX24110.1
PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.746
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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