STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX24572.1PFAM: Disulfide bond formation protein DsbB. (157 aa)    
Predicted Functional Partners:
APX24573.1
Putative membrane protein; PFAM: SNARE associated Golgi protein.
       0.849
APX21837.1
PFAM: putative DUF1013 protein.
  
     0.608
APX21853.1
Protein-disulfide isomerase; PFAM: Thioredoxin.
 
 
 0.605
APX22686.1
Hypothetical protein; PFAM: Tim44-like domain.
  
     0.595
APX24590.1
PFAM: Stringent starvation protein B.
  
     0.579
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.552
APX24216.1
Protein-disulfide isomerase; PFAM: DSBA-like thioredoxin domain.
 
 
 0.526
APX22577.1
Protein-disulfide isomerase; PFAM: Thioredoxin.
 
 
 0.512
APX24639.1
Hypothetical protein; FIG094713.
 
 
 0.506
APX24024.1
NADH dehydrogenase; PFAM: ETC complex I subunit conserved region.
  
    0.498
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.