STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX24926.1PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase. (376 aa)    
Predicted Functional Partners:
APX22568.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.980
APX24547.1
Alcohol dehydrogenase, class IV; PFAM: Iron-containing alcohol dehydrogenase.
  
 
 0.632
APX25682.1
Hypothetical protein; PFAM: Iron-containing alcohol dehydrogenase.
  
 
 0.632
APX24925.1
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like; PFAM: short chain dehydrogenase.
 
 
 0.631
APX24948.1
L-iditol 2-dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
 
 
 
0.574
gfa
S-(hydroxymethyl)glutathione synthase; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family.
    
 0.536
APX24684.1
PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
 
 
 
0.512
APX24924.1
TRAP-type C4-dicarboxylate transport system, periplasmic component; 'PFAM: Bacterial extracellular solute-binding protein, family 7'.
       0.464
APX21402.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
  
 0.449
APX22277.1
PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region.
  
    0.414
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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