STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX25267.1PFAM: Protein of unknown function (DUF1153). (98 aa)    
Predicted Functional Partners:
APX22655.1
PFAM: Flagellar protein FlbT.
   
    0.999
APX22654.1
PFAM: Flagellar protein FlaF.
   
    0.946
APX23977.1
Serine/threonine-protein kinase RsbW; PFAM: Histidine kinase-like ATPase domain.
   
    0.946
APX23525.1
Flp pilus assembly protein TadG; PFAM: von Willebrand factor type A domain; Putative Flp pilus-assembly TadE/G-like.
  
    0.790
APX24202.1
Flagellar motor switch protein FliG; PFAM: FliG middle domain; FliG C-terminal domain; FliG N-terminal domain.
  
    0.776
APX22675.1
Flagellar hook-associated protein 1 FlgK; PFAM: Flagellar basal body rod FlgEFG protein C-terminal; TIGRFAM: flagellar hook-associated protein FlgK.
  
    0.734
APX22826.1
PFAM: putative DUF2794 protein.
  
     0.731
APX21636.1
PFAM: putative DUF2948 protein.
  
     0.728
APX22653.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
    0.727
APX23744.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
    0.727
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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