STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX25452.1PFAM: ETC complex I subunit conserved region. (197 aa)    
Predicted Functional Partners:
APX25453.1
Molecular chaperone IbpA; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
 
     0.598
APX25439.1
Rrf2 family transcriptional regulator, group III.
 
     0.559
APX25457.1
PFAM: Glycosyltransferase Family 4; Glycosyl transferases group 1.
  
     0.484
APX25458.1
Monovalent cation:H+ antiporter-2, CPA2 family; PFAM: Sodium/hydrogen exchanger family.
 
    0.469
APX23558.1
PFAM: ATPase family associated with various cellular activities (AAA).
 
 
   0.446
APX22375.1
Hypothetical protein.
  
     0.427
APX23572.1
Hypothetical protein.
  
     0.427
APX22760.1
Hypothetical protein; PFAM: Esterase-like activity of phytase.
  
     0.402
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.