STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX25463.1Molecular chaperone (small heat shock protein); PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family. (132 aa)    
Predicted Functional Partners:
APX25462.1
PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
 
    
0.809
APX25447.1
PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
 
     0.791
APX25459.1
ATP-dependent Clp protease ATP-binding subunit ClpC; 'PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain, pathogenicity island component; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)'; Belongs to the ClpA/ClpB family.
 
 
 0.746
APX25464.1
Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
 
    
0.742
ftsH-3
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
 
  
 0.574
APX22876.1
Hypothetical protein.
   
    0.522
APX22121.1
ATP-dependent Clp protease ATP-binding subunit ClpA; 'PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain, pathogenicity island component; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA)'; TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA; Belongs to the ClpA/ClpB family.
  
 
 0.502
clpB
ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
  
 
 0.502
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.494
APX25461.1
Heat shock protein HtpX; PFAM: Peptidase family M48.
  
  
 0.468
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.