STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX21301.1Hypothetical protein. (126 aa)    
Predicted Functional Partners:
APX21302.1
Hypothetical protein.
       0.773
APX21303.1
Hypothetical protein.
       0.773
APX21304.1
AAA domain-containing protein; PFAM: AAA domain.
       0.773
APX21305.1
Mu DNA-binding domain-containing protein; 'PFAM: Mu transposase, C-terminal; Mu DNA binding, I gamma subdomain; Bacteriophage Mu transposase; Mu DNA-binding domain'.
       0.727
APX21306.1
Chromosome partitioning protein, ParB family; PFAM: ParB-like nuclease domain; TIGRFAM: ParB/RepB/Spo0J family partition protein.
       0.727
APX21307.1
Hypothetical protein.
       0.722
APX21308.1
Hypothetical protein.
       0.722
APX21309.1
Hypothetical protein.
       0.722
APX21298.1
PFAM: putative DUF3164 protein.
       0.651
APX21299.1
Hypothetical protein.
       0.651
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.