STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX21532.1Cytochrome c, mono- and diheme variants family; PFAM: Cytochrome c. (150 aa)    
Predicted Functional Partners:
APX21533.1
PFAM: Multicopper oxidase.
 
  
 0.895
APX22572.1
'PFAM: Cytochrome c; Cytochrome C oxidase subunit II, periplasmic domain'; 'TIGRFAM: cytochrome c oxidase, subunit II'.
  
 
 0.855
APX21818.1
Sulfur dehydrogenase subunit SoxD; 'PFAM: Cytochrome c; Cytochrome C oxidase, cbb3-type, subunit III'.
   
 
 0.783
APX21534.1
Cytochrome c, mono- and diheme variants family.
 
     0.777
APX23283.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.726
APX21531.1
27kDa outer membrane protein.
 
     0.710
APX23282.1
Ubiquinol-cytochrome c reductase cytochrome b subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.687
APX22403.1
Nitric oxide reductase, NorB subunit apoprotein; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
 
 0.633
APX22548.1
'PFAM: Cytochrome C oxidase, mono-heme subunit/FixO'; 'TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II'.
  
 
 0.607
APX23509.1
'PFAM: Cytochrome C oxidase, mono-heme subunit/FixO'; 'TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II'.
  
 
 0.607
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.