STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APX21656.1Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; 'TIGRFAM: urea ABC transporter, permease protein UrtB'; Belongs to the binding-protein-dependent transport system permease family. (652 aa)    
Predicted Functional Partners:
APX21655.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Periplasmic binding protein domain; 'TIGRFAM: urea ABC transporter, urea binding protein'.
 
 
 0.993
APX21658.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; 'TIGRFAM: urea ABC transporter, permease protein UrtC'; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
APX21660.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter; 'TIGRFAM: urea ABC transporter, ATP-binding protein UrtE'.
 
 
 0.983
APX21659.1
Urea transport system ATP-binding protein; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; 'TIGRFAM: urea ABC transporter, ATP-binding protein UrtD'.
 
 0.981
APX24395.1
PFAM: Periplasmic binding protein domain; 'TIGRFAM: urea ABC transporter, substrate-binding protein, archaeal type'.
 
 
 0.961
APX24382.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; PFAM: Periplasmic binding protein.
 
 
 0.954
APX24394.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.918
APX24393.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.801
APX24391.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter; 'TIGRFAM: urea ABC transporter, ATP-binding protein UrtE'.
 
  
 0.761
APX24392.1
Urea transport system ATP-binding protein; PFAM: ABC transporter.
  
 0.719
Your Current Organism:
Salipiger profundus
NCBI taxonomy Id: 1229727
Other names: CGMCC 1.12377, DSM 27508 [[Salipiger nanhaiensis]], Donghicola sp. ZH114, JCM 19383 [[Salipiger nanhaiensis]], KCTC 32468 [[Salipiger nanhaiensis]], LMG 27365, LMG:27365, S. profundus, Salipiger nanhaiensis, Salipiger nanhaiensis Dai et al. 2015, Salipiger sp. JLT2016, Thiobacimonas profunda, Thiobacimonas profunda Li et al. 2015 emend. Huang et al. 2017, strain JLT2016, strain ZH114 [[Salipiger nanhaiensis]]
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