STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFS39596.1ABC transporter permease and substrate binding protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. (660 aa)    
Predicted Functional Partners:
AFS39595.1
Bacitracin export ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.983
AFS39598.1
Histidine protein kinase sensor protein; COG0642 Signal transduction histidine kinase.
 
 
 
 0.957
AFS39597.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.942
AFS39461.1
COG0845 Membrane-fusion protein.
 
 
 0.835
AFS40864.1
ABC transporter ATP-binding/permease protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.783
AFS39462.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.616
AFS39880.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
 
 0.612
AFS39483.1
Lactococcin A ABC transporter permease; COG0845 Membrane-fusion protein.
  
  
 0.598
AFS39599.1
Membrane protein.
 
     0.594
AFS41242.1
ABC transporter ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.564
Your Current Organism:
Leuconostoc gelidum
NCBI taxonomy Id: 1229756
Other names: L. gelidum JB7, Leuconostoc gelidum JB7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.