STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFT82249.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
AFT82248.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
       0.781
AFT82250.1
Hypothetical protein.
       0.781
AFT82251.1
COG4537 Competence protein ComGC.
       0.781
AFT82252.1
ComG operon protein 2; COG1459 Type II secretory pathway, component PulF.
       0.781
AFT82253.1
Hypothetical protein; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
       0.781
AFT82247.1
Hypothetical protein.
       0.780
AFT82246.1
Type I restriction-modification system methyltransferase subunit(); COG0827 Adenine-specific DNA methylase.
       0.678
pgi
COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.531
ackA-2
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.441
Your Current Organism:
Leuconostoc carnosum
NCBI taxonomy Id: 1229758
Other names: L. carnosum JB16, Leuconostoc carnosum JB16
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