STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM62264.1Hypothetical protein; No homology to any previously reported sequences. (43 aa)    
Predicted Functional Partners:
CCM62263.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.623
CCM62265.1
Hypothetical protein; No homology to any previously reported sequences.
       0.555
CCM62266.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.555
CCM62262.1
Putative tRNA nucleotidyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
       0.487
CCM62267.1
Putative Serine/threonine protein kinase PrkC regulator of stationary phase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.421
CCM62268.1
Putative RNA polymerase, sigma-24 subunit, ECF subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the sigma-70 factor family. ECF subfamily.
       0.421
CCM62269.1
Hypothetical protein; No homology to any previously reported sequences.
       0.421
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.