STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM61997.1Membrane hypothetical protein; No homology to any previously reported sequences. (598 aa)    
Predicted Functional Partners:
tuaD
UDP-glucose 6-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
  
 0.776
CCM61881.1
dTDP-4-dehydrorhamnose 35-epimerase related.
  
  
 0.774
CCM61998.1
Membrane hypothetical protein; No homology to any previously reported sequences.
       0.774
CCM61999.1
Putative Methyltransferase type 11; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.774
CCM61890.1
Membrane hypothetical protein; No homology to any previously reported sequences.
  
  
 0.761
CCM64707.1
Putative UDP-galactose phosphate transferase (WeeH) (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
  
 0.761
spsJ
Putative dTDP-glucose 4,6-dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.657
CCM64888.1
Putative NAD-dependent epimerase/dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.657
strD
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.656
CCM65171.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
 0.656
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.