STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM62076.1Hypothetical protein; No homology to any previously reported sequences. (80 aa)    
Predicted Functional Partners:
CCM64287.1
Membrane hypothetical protein; No homology to any previously reported sequences.
  
 0.859
nodQ
Bifunctional enzyme nodQ (Includes: Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.779
CCM62075.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.773
CCM62510.1
Putative ABC transporter related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
  0.617
CCM62511.1
Putative ABC transporter related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
  0.617
CCM62825.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
    
  0.617
yfiC
Putative ABC transporter (ATP-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
  0.617
CCM63387.1
ATP-binding protein of ABC transporter.
    
  0.617
CCM64877.1
Putative ABC transporter, ATP-binding/permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
  0.617
CCM65375.1
ABC transporter related.
    
  0.617
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.