STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nnrDConserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family. (487 aa)    
Predicted Functional Partners:
CCM61912.1
Helicase SNF2 family protein.
  
 0.992
CCM62853.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the Nudix hydrolase family.
  
 0.988
CCM63723.1
Putative NTP pyrophosphohydrolases including oxidative damage repair enzymes; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.988
CCM63831.1
Putative NTP pyrophosphohydrolases including oxidative damage repair enzymes; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.988
nudH
Nucleotide hydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.988
CCM64277.1
ATP-independent RNA helicase (modular protein).
   
 0.976
rhlE
RNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.976
CCM65810.1
DEAD/DEAH box helicase domain protein (fragment).
   
 0.976
CCM62472.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.950
CCM62471.1
Putative Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
    0.869
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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