STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM62859.1Hypothetical protein; No homology to any previously reported sequences. (121 aa)    
Predicted Functional Partners:
dinB-2
Putative DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.794
CCM62861.1
Hypothetical protein; No homology to any previously reported sequences; Belongs to the Nudix hydrolase family.
       0.773
CCM61839.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.728
CCM62862.1
Hypothetical protein; No homology to any previously reported sequences.
       0.572
CCM62863.1
Putative Inositol-1-monophosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the inositol monophosphatase superfamily.
       0.572
CCM61970.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0434 family.
  
     0.527
CCM62809.1
Putative thioredoxin-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.470
CCM62235.1
Putative Response regulator receiver protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.462
CCM63035.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.404
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.