STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM62989.1Putative ABC-type branched-chain amino acid transport systems periplasmic component-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (460 aa)    
Predicted Functional Partners:
CCM62011.1
Membrane hypothetical protein; No homology to any previously reported sequences; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.980
CCM63501.1
Membrane hypothetical protein; No homology to any previously reported sequences; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.970
CCM62012.1
Putative Monosaccharide-transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.969
CCM62657.1
Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.968
CCM61804.1
Putative ABC-type transporter, integral membrane subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.967
CCM62986.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.923
CCM62985.1
Putative Inner-membrane translocator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.917
CCM62550.1
Putative ABC transporter permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.915
CCM62549.1
Putative Inner-membrane translocator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.912
CCM62987.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 
 0.880
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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