STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM63003.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (351 aa)    
Predicted Functional Partners:
CCM63005.1
Glycosyl transferase.
 
  
  0.958
CCM63004.1
Methyltransferase type 11.
 
     0.952
CCM63001.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.792
CCM61994.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.791
CCM63006.1
Membrane hypothetical protein; No homology to any previously reported sequences.
       0.523
CCM62330.1
Putative glycosyl hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.509
CCM61834.1
Hypothetical protein; No homology to any previously reported sequences.
 
  
 0.508
otsA
Trehalose-phosphate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.507
CCM63807.1
Putative trehalose-6-phosphate phosphatase (otsB); Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
    
 0.502
CCM62468.1
Putative Glutamine--fructose-6-phosphate transaminase (Isomerizing); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.501
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.