STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM63004.1Methyltransferase type 11. (250 aa)    
Predicted Functional Partners:
CCM63005.1
Glycosyl transferase.
 
     0.955
CCM63003.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.952
CCM63001.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.788
CCM61994.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.783
gcvP
Glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.715
CCM65868.1
Putative Methyltransferase type 11; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.551
CCM63006.1
Membrane hypothetical protein; No homology to any previously reported sequences.
    
  0.547
CCM63523.1
Putative Erythronolide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
 0.455
CCM64636.1
Putative acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
   
  0.435
CCM63002.1
Hypothetical protein; No homology to any previously reported sequences.
       0.432
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.