STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM63128.1Hypothetical protein; No homology to any previously reported sequences. (848 aa)    
Predicted Functional Partners:
CCM63129.1
Hypothetical protein; No homology to any previously reported sequences.
 
     0.895
CCM62089.1
Putative DNA helicase II homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
 
 0.722
CCM63807.1
Putative trehalose-6-phosphate phosphatase (otsB); Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.709
CCM65904.1
ERCC4 domain protein.
    
  0.647
CCM61948.1
Putative Glycosyl transferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.607
CCM61949.1
Putative Glycosyl transferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.526
CCM62775.1
Putative glycotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.510
CCM63132.1
Membrane hypothetical protein; No homology to any previously reported sequences.
     
 0.509
CCM63130.1
Hypothetical protein; No homology to any previously reported sequences.
       0.503
CCM63131.1
Membrane hypothetical protein; No homology to any previously reported sequences.
       0.503
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.