STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ykoGTwo-component response regulator (YkoH); Function of homologous gene experimentally demonstrated in an other organism; regulator. (223 aa)    
Predicted Functional Partners:
CCM63471.1
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  0.970
CCM63816.1
Putative Two-component system histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.955
CCM63847.1
Putative Phosphate regulon sensor protein phoR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 0.916
CCM63475.1
Putative Sensory histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.906
CCM64599.1
Putative Two-component system sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.
 0.891
CCM62865.1
Putative ATPase domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.889
CCM64184.1
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  0.876
CCM65652.1
Putative two-component sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  0.876
CCM65137.1
Putative Uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
     
 0.784
ribAB
Fused GTP cyclohydrolase II and 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.766
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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