STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM63537.1Putative ABC transport system integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (855 aa)    
Predicted Functional Partners:
yvcR
Putative ABC transporter (ATP-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 0.999
yvrO
Putative ABC transporter (ATP-binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 0.998
ytrE
ABC transporter (ATP-binding protein); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.998
CCM62430.1
Putative Phosphonate-transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 0.998
lolD
Transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind); Function of homologous gene experimentally demonstrated in an other organism; transporter.
 0.998
CCM65637.1
Lipoprotein releasing system, ATP-binding protein.
 0.998
nucS
Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.567
CCM63826.1
Putative RNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.554
CCM63536.1
Membrane hypothetical protein; No homology to any previously reported sequences.
       0.497
CCM62871.1
Membrane hypothetical protein; No homology to any previously reported sequences.
 
 
0.484
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.