STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM63840.1Putative DSBA oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (216 aa)    
Predicted Functional Partners:
CCM63813.1
Hypothetical protein; No homology to any previously reported sequences; Belongs to the ArsC family.
   
   0.882
CCM64643.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
   0.791
CCM65681.1
Putative 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.777
CCM64568.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.768
CCM64048.1
Putative LmbE family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.732
CCM62103.1
1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D- glucopyranoside deacetylase.
  
     0.680
CCM65145.1
Putative D-inositol-3-phosphate glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.632
CCM63919.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.606
CCM65155.1
Transcriptional regulator, MarR family.
  
     0.579
CCM63838.1
Putative EstD2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.572
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.