STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM63919.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (281 aa)    
Predicted Functional Partners:
CCM64568.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
   
 0.781
CCM63920.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CCM63921.1
Putative HTH-type transcriptional repressor KstR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
CCM63143.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.761
CCM65841.1
Putative 2-oxoglutarate:ferredoxin oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.736
whiB-2
Transcription factor WhiB (modular protein); Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.708
whiB-3
Putative WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.684
nucS
Conserved hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.
  
     0.664
CCM64472.1
Putative MerR family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.659
whiB
Hypothetical protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.635
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.