STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM64029.1Hypothetical protein; No homology to any previously reported sequences. (241 aa)    
Predicted Functional Partners:
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.810
CCM64027.1
Putative rRNA methyltransferase ylbH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.694
CCM64030.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.642
sepF
Putative Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
     0.564
rsmG
Putative Glucose inhibited division protein; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
     0.537
CCM64026.1
Hypothetical protein; No homology to any previously reported sequences.
       0.535
rpmF
Putative 50S ribosomal protein L32; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure; Belongs to the bacterial ribosomal protein bL32 family.
       0.486
CCM65317.1
Putative FHA domain containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.456
CCM62631.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.416
CCM63284.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.414
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.