STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM64422.1Alpha-galactosidase (fragment). (93 aa)    
Predicted Functional Partners:
CCM64423.1
Alpha-galactosidase (fragment).
     0.908
CCM63903.1
Putative Beta-galactosidase. Glycosyl Hydrolase family 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
  0.812
CCM62682.1
Putative Alpha-galactosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
0.802
CCM64650.1
Putative Exo-alpha-sialidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
  0.789
CCM63151.1
Alpha-galactosidase.
  
  
 
0.764
CCM64706.1
Hypothetical protein; No homology to any previously reported sequences.
    
 0.757
CCM62834.1
Putative Alpha-galactosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.754
galM
Aldose 1-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
  0.753
CCM63681.1
Glycoside hydrolase family 29 (Alpha-L-fucosidase) (modular protein).
 
     0.586
CCM65496.1
Exported hypothetical protein; No homology to any previously reported sequences.
    
 0.486
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.