STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM64459.1Membrane hypothetical protein; No homology to any previously reported sequences. (364 aa)    
Predicted Functional Partners:
CCM62234.1
Putative Anti-sigma-B factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the anti-sigma-factor antagonist family.
 
 0.956
CCM65437.1
Putative Anti-sigma F factor antagonist; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the anti-sigma-factor antagonist family.
 
 0.900
CCM65436.1
Hypothetical protein; No homology to any previously reported sequences.
 
 0.831
CCM63017.1
Hypothetical protein; No homology to any previously reported sequences.
 
 0.813
CCM64556.1
Radical SAM domain protein.
   
  
 0.801
CCM65434.1
Hypothetical protein; No homology to any previously reported sequences.
  
 0.778
CCM64460.1
Putative carboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.773
CCM64457.1
Fe-S oxidoreductase, related to NifB/MoaA family.
     
 0.616
engA
GTPase; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
       0.605
CCM64461.1
Hypothetical protein; No homology to any previously reported sequences.
       0.581
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.