Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CCM62529.1 | CCM62579.1 | BN381_130087 | BN381_130137 | Putative HtrA2 peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Hypothetical protein; No homology to any previously reported sequences. | 0.768 |
| CCM62529.1 | CCM64524.1 | BN381_130087 | BN381_400042 | Putative HtrA2 peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Proteasome subunit alpha (modular protein); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.794 |
| CCM62529.1 | CCM65586.1 | BN381_130087 | BN381_80116 | Putative HtrA2 peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative CysO-cysteine peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.841 |
| CCM62529.1 | arc | BN381_130087 | BN381_410004 | Putative HtrA2 peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.982 |
| CCM62529.1 | glpK | BN381_130087 | BN381_140033 | Putative HtrA2 peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.838 |
| CCM62529.1 | glpK-2 | BN381_130087 | BN381_170037 | Putative HtrA2 peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Glycerol kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FGGY kinase family. | 0.838 |
| CCM62529.1 | prcB | BN381_130087 | BN381_400043 | Putative HtrA2 peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.794 |
| CCM62579.1 | CCM62529.1 | BN381_130137 | BN381_130087 | Hypothetical protein; No homology to any previously reported sequences. | Putative HtrA2 peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.768 |
| CCM62579.1 | CCM64524.1 | BN381_130137 | BN381_400042 | Hypothetical protein; No homology to any previously reported sequences. | Proteasome subunit alpha (modular protein); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.817 |
| CCM62579.1 | CCM65586.1 | BN381_130137 | BN381_80116 | Hypothetical protein; No homology to any previously reported sequences. | Putative CysO-cysteine peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.841 |
| CCM62579.1 | arc | BN381_130137 | BN381_410004 | Hypothetical protein; No homology to any previously reported sequences. | Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.982 |
| CCM62579.1 | glpK | BN381_130137 | BN381_140033 | Hypothetical protein; No homology to any previously reported sequences. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate. | 0.838 |
| CCM62579.1 | glpK-2 | BN381_130137 | BN381_170037 | Hypothetical protein; No homology to any previously reported sequences. | Glycerol kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FGGY kinase family. | 0.838 |
| CCM62579.1 | prcB | BN381_130137 | BN381_400043 | Hypothetical protein; No homology to any previously reported sequences. | Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | 0.794 |
| CCM64524.1 | CCM62529.1 | BN381_400042 | BN381_130087 | Proteasome subunit alpha (modular protein); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Putative HtrA2 peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.794 |
| CCM64524.1 | CCM62579.1 | BN381_400042 | BN381_130137 | Proteasome subunit alpha (modular protein); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Hypothetical protein; No homology to any previously reported sequences. | 0.817 |
| CCM64524.1 | CCM64534.1 | BN381_400042 | BN381_410003 | Proteasome subunit alpha (modular protein); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.867 |
| CCM64524.1 | CCM64963.1 | BN381_400042 | BN381_50105 | Proteasome subunit alpha (modular protein); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Hypothetical protein; No homology to any previously reported sequences. | 0.836 |
| CCM64524.1 | CCM65586.1 | BN381_400042 | BN381_80116 | Proteasome subunit alpha (modular protein); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Putative CysO-cysteine peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.992 |
| CCM64524.1 | arc | BN381_400042 | BN381_410004 | Proteasome subunit alpha (modular protein); Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. | Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.999 |
page 1 of 5