STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM65174.1Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. (343 aa)    
Predicted Functional Partners:
CCM62617.1
Patatin.
 
  
  0.773
CCM65173.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CCM64953.1
Hypothetical protein; No homology to any previously reported sequences.
 
  
  0.674
CCM65175.1
Putative Phospholipase/Carboxylesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
  0.672
CCM63680.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.586
CCM62797.1
Putative Patatin-like phospholipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
  0.585
CCM65172.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.529
CCM64429.1
Putative cation-transporting ATPase I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
  0.525
yloB
P-type calcium transport ATPase; Function of homologous gene experimentally demonstrated in an other organism; transporter.
    
  0.513
CCM62704.1
Patatin-like protein.
 
  
  0.507
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.