STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM65351.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (742 aa)    
Predicted Functional Partners:
CCM65353.1
Putative DNA modification methylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.860
CCM65352.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.800
CCM65350.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CCM65354.1
Putative antirestriction protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.
 
     0.743
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
     
 0.520
CCM65349.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.455
CCM65361.1
Putative recombinase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.444
CCM65347.1
Hypothetical protein; No homology to any previously reported sequences.
       0.442
CCM65348.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.442
CCM62297.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.407
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.