STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM65421.1Hypothetical protein; No homology to any previously reported sequences. (96 aa)    
Predicted Functional Partners:
CCM65419.1
Putative Nucleotidyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
CCM65420.1
DNA polymerase beta domain protein region.
       0.773
CCM65418.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.741
CCM65422.1
Hypothetical protein; No homology to any previously reported sequences.
       0.572
CCM65423.1
Hypothetical protein; No homology to any previously reported sequences.
       0.476
CCM65417.1
Hypothetical protein; No homology to any previously reported sequences; Belongs to the 'phage' integrase family.
       0.443
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.