STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM65575.1Hypothetical protein; No homology to any previously reported sequences. (234 aa)    
Predicted Functional Partners:
CCM64076.1
Hypothetical protein; No homology to any previously reported sequences.
  
    0.811
secA
Translocase binding subunit (ATPase); Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
       0.811
CCM62089.1
Putative DNA helicase II homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
  0.802
CCM64062.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.791
xerD
Site-specific tyrosine recombinase; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.741
CCM65199.1
Putative phage integrase related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the 'phage' integrase family.
   
    0.741
CCM65200.1
Putative phage integrase related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
    0.741
CCM65020.1
Putative Prephenate dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.735
CCM61888.1
Putative ABC transporter related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.720
CCM61891.1
Putative O-antigen export system ATP-binding protein RfbB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.720
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.