STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM65637.1Lipoprotein releasing system, ATP-binding protein. (227 aa)    
Predicted Functional Partners:
CCM63537.1
Putative ABC transport system integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.998
CCM62145.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 0.978
CCM65636.1
Putative ABC-type antimicrobial peptide transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 0.933
ykfD
Putative cell wall oligopeptide ABC transporter (ATP binding protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily.
 
     
0.900
proV
Glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, ABC protein.
 
   
0.886
CCM65375.1
ABC transporter related.
    
0.864
CCM63387.1
ATP-binding protein of ABC transporter.
     
0.856
CCM62871.1
Membrane hypothetical protein; No homology to any previously reported sequences.
 
 0.829
CCM62182.1
Membrane hypothetical protein; No homology to any previously reported sequences.
 
 0.816
CCM65638.1
Hypothetical protein; No homology to any previously reported sequences.
   
   0.790
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.