STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM65722.1Exported hypothetical protein; No homology to any previously reported sequences. (571 aa)    
Predicted Functional Partners:
CCM64617.1
Hypothetical protein; No homology to any previously reported sequences.
  
 0.993
CCM64669.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
   0.594
CCM64622.1
Hypothetical protein; No homology to any previously reported sequences.
  
  
0.549
CCM65719.1
Exported hypothetical protein; No homology to any previously reported sequences.
 
  
 
0.511
CCM66034.1
Exported hypothetical protein; No homology to any previously reported sequences.
   
 0.475
CCM63882.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 0.469
CCM65846.1
Putative Nitrite reductase (NO-forming); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.456
CCM63055.1
Hypothetical protein; No homology to any previously reported sequences.
    
   0.441
CCM65772.1
Putative DNA translocase FtsK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
    
   0.441
CCM62305.1
Cobyrinic acid a,c-diamide synthase.
  
 
   0.434
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.