STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM65752.1Hypothetical protein; No homology to any previously reported sequences. (156 aa)    
Predicted Functional Partners:
CCM65753.1
Hypothetical protein; No homology to any previously reported sequences.
       0.773
CCM65749.1
Membrane hypothetical protein; No homology to any previously reported sequences.
       0.705
CCM65750.1
Hypothetical protein; No homology to any previously reported sequences.
       0.705
CCM65751.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.705
menC
Putative Mandelate racemase/muconate lactonizing protein; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
       0.564
CCM65754.1
Hypothetical protein; No homology to any previously reported sequences.
       0.551
CCM65755.1
Membrane hypothetical protein; No homology to any previously reported sequences.
       0.430
CCM65756.1
Membrane hypothetical protein; No homology to any previously reported sequences.
       0.430
CCM65757.1
Putative Type II secretion system protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.430
CCM65758.1
Hypothetical protein; No homology to any previously reported sequences.
       0.430
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.