STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM65830.1Putative Alpha/beta hydrolase fold protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (340 aa)    
Predicted Functional Partners:
CCM65020.1
Putative Prephenate dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.822
CCM65828.1
Putative epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.752
CCM65829.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.752
CCM65827.1
Putative glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
   0.581
CCM65371.1
Putative Alpha/beta hydrolase fold; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.566
CCM65777.1
Putative CinA-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the CinA family.
    
  0.553
CCM65826.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.547
menD
Putative 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.
 
 
 0.518
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
   
  0.492
CCM63817.1
Putative carboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 
 0.462
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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